Product References

Boston Biochem's products have been used successfully in hundreds of UPP-related publications. We have listed our most recent references below to provide our customers with an exceptional resource for product use information. The references are organized to mirror our product divisions for easy location. Products referenced in each article are listed below in red. Please inquire to request archives as we have curated references back to 2003.

Deubiquitinating Enzymes

Ratia, K, et al. (2008). "A non-covalent class of papain-like protease/deubiquitinase inhibitors blocks SARS virus replication." PNAS 105 (42): 16119-16124 .

PubMed ID: 18852458 | Product(s) Referenced: full-length USP-18, the catalytic domain of HAUSP, ubiquitin-AMC

Ogawa, M., et al. (2008) "Rines/RNF180, a novel RING finger gene-encoded product, is a membrane-bound ubiquitin ligase." Genes Cells 13: 397-409.

PubMed ID: 18363970 | Product(s) Referenced: epoxomicin, lactacystin

Catic A., et al. (2007) "Screen for ISG15-cross-reactive Deubiquitinases." PLoS ONE 2(7): E769.

PubMed ID: 17653289 | Product(s) Referenced: human recombinant USP14

Ghaboosi, N. and R. J. Deshaies (2007). "A Conditional Yeast E1 Mutant Blocks the Ubiquitin-Proteasome Pathway and Reveals a Role for Ubiquitin Conjugates in Targeting Rad23 to the Proteasome." Mol. Biol. Cell 18(5): 1953-1963.

PubMed ID: 17360968 | Product(s) Referenced: ubiquitin-aldehyde

Hong, K. U., et al. (2007). "Functional Importance of the Anaphase-Promoting Complex-Cdh1-Mediated Degradation of TMAP/CKAP2 in Regulation of Spindle Function and Cytokinesis." Mol. Cell. Biol. 27(10): 3667-3681.

PubMed ID: 17339342 | Product(s) Referenced: ubiquitin aldehyde

Kamynina, E., et al. (2007). "Regulation of Proto-Oncogenic Dbl by Chaperone-Controlled, Ubiquitin-Mediated Degradation.” Mol. Cell. Biol. 27(5): 1809-1822.

PubMed ID: 17178836 | Product(s) Referenced: ubiquitin-aldehyde

Liu, Y., et al. (2007). "Histone H2AX Is a Mediator of Gastrointestinal Stromal Tumor Cell Apoptosis following Treatment with Imatinib Mesylate." Canc. Res. 67(6): 2685-2692 .

PubMed ID: 17363589 | Product(s) Referenced: ubiquitin aldehyde

Rytkonen, A., et al. (2007) "SseL, a Salmonella deubiquitinase required for macrophage killing and virulence4." PNAS 104(9): 3502-3507.

Product(s) Referenced: SENP1

Todi, S. V., et al. (2007). "Cellular turnover of the polyglutamine disease protein ataxin-3 is regulated by its catalytic activity." J. Biol. Chem.: 282(40): 29348-29358.

PubMed ID: 17693639 | Product(s) Referenced: ubiquitin-aldehyde

Yi, Y.-J., et al. (2007). "Ubiquitin C-Terminal Hydrolase-Activity Is Involved in Sperm Acrosomal Function and Anti-Polyspermy Defense During Porcine Fertilization." Biol. Reprod.77:780-793.

PubMed ID: 17671268 | Product(s) Referenced: recombinant human UCHL3

Avvakumov, G. V., et al. (2006). "Amino-terminal dimerization, NRDP1 (FLRF) - rhodanese interaction, and inhibited catalytic domain conformation of the ubiquitin specific protease 8 (USP8/UBPY)." J. Biol. Chem.281(49):38061-38070.

PubMed ID: 17035239 | Product(s) Referenced: NEDD8-AMC

Das, C., et al. (2006). "Structural basis for conformational plasticity of the Parkinson's disease-associated ubiquitin hydrolase UCH-L1." PNAS 103(12): 4675-4680.

PubMed ID: 16537382 | Product(s) Referenced: WT UCH-L1

Song, B.-L. and R. A. DeBose-Boyd (2006). "Insig-dependent Ubiquitination and Degradation of 3-Hydroxy-3-methylglutaryl Coenzyme A Reductase Stimulated by δ- and γ-Tocotrienols." J. Biol. Chem. 281(35): 25054-25061.

PubMed ID: 16831864 | Product(s) Referenced: ubiquitin-aldehyde

Yamada, M., J. Ohnishi, et al. (2006). "NARF, an emo-like Kinase (NLK)-associated Ring Finger Protein Regulates the Ubiquitylation and Degradation of T Cell Factor/Lymphoid Enhancer Factor (TCF/LEF)." J. Biol. Chem. 281(30): 20749-20760.

PubMed ID: 16714285 | Product(s) Referenced: ubiquitin aldehyde

Zollars, E. S., et al. (2006). "Simple electrostatic model improves designed protein sequences." Protein Sci. 15(8): 2014-2018.

PubMed ID: http://onlinelibrary.wiley.com/doi/10.1110/ps.062105506/full | Product(s) Referenced: protease UCH-L3

Gentry M. S., et al. (2005) "From The Cover: Insights into Lafora disease: Malin is an E3 ubiquitin ligase that ubiquitinates and promotes the degradation of laforin." PNAS 102(24): 8501-8506.

PubMed ID: 15930137 | Product(s) Referenced: WT ubiquitin

Koshikawa N. and Takenaga K. (2005) "Hypoxia-Regulated Expression of Attenuated Diphtheria Toxin A Fused with Hypoxia-Inducible Factor-1[alpha]/Oxygen-Dependent Degradation Domain Preferentially Induces Apoptosis of Hypoxic Cells in Solid Tumor." Can. Res. 65(2 .

PubMed ID: 16357173 | Product(s) Referenced: ubiquitin aldehyde

Lindner H. A., et al. (2005) "The Papain-Like Protease from the Severe Acute Respiratory Syndrome Coronavirus is a Deubiquitinating Enzyme." J. Virol. 79(24): 15199-15208.

PubMed ID: 16306591 | Product(s) Referenced: ubiquitin aldehyde

Lolkema M.P., et al. (2005) "Tumor Suppression by the von Hippel-Lindau Protein Requires Phosphorylation of the Acidic Domain." J. Biol. Chem. 280(23): 22205-22211.

PubMed ID: 15824109 | Product(s) Referenced: ubiquitin aldehyde

Shirogane T., et al. (2005) "SCF[beta]-TRCP Controls Clock-dependent Transcription via Casein Kinase 1-dependent Degradation of the Mammalian Period-1 (Per1) Protein." J. Biol. Chem. 280(29): 26863-26872.

PubMed ID: 15917222 | Product(s) Referenced: ubiquitin aldehyde

Zvonic S., et al. (2005) "Cross-talk among gp130 Cytokines in Adipocytes." J. Biol. Chem. 280(40): 33856-33863.

PubMed ID: 16096272 | Product(s) Referenced: MG132

Burstein E., et al. (2004) "A novel role for XIAP in copper homeostasis through regulation of MURR1." EMBO J. 23(1): 244-254.

Product(s) Referenced: ubiquitin aldehyde

Evans, P.C., et al. (2004). "Zinc-finger protein A20, a regulator of inflammation and cell survival has de-ubiquitination activity." Biochem. J. 378: 727-734.

PubMed ID: 14748687 | Product(s) Referenced: [Lys63 ]polyubiquitin

Habelhah H., et al. (2004) "Ubiquitination and translocation of TRAF2 is required for activation of JNK but not of p38 or NF-κB." EMBO J. 23(2): 322-332.

PubMed ID: 14713952 | Product(s) Referenced: Ub aldehyde

Nishikawa H., et al. (2004) "Mass Spectrometric and Mutational Analyses Reveal Lys-6-linked Polyubiquitin Chains Catalyzed by BRCA1-BARD1 Ubiquitin Ligase." J. Biol. Chem. 279(6): 3916-3924.

PubMed ID: 14638690 | Product(s) Referenced: Ubal (ubiquitin aldehyde)

E1 Activating

PubMed ID: 24210823 | Product(s) Referenced: other enzymes than Uba1
PubMed ID: 24124579 | Product(s) Referenced: UBE1, human recombinant
PubMed ID: 24371121 | Product(s) Referenced: E1
PubMed ID: 24292674 | Product(s) Referenced: E1
PubMed ID: 24318982 | Product(s) Referenced: mammalian E1
PubMed ID: 24361105 | Product(s) Referenced: purified S. cerevisiae Uba1
PubMed ID: 24336050 | Product(s) Referenced: E1(UBE1)
PubMed ID: 24360965 | Product(s) Referenced: E1(APPBP1)
PubMed ID: 24366945 | Product(s) Referenced: E1
PubMed ID: 24337465 | Product(s) Referenced: E1 recombinant enzyme
PubMed ID: 24386307 | Product(s) Referenced: recombinant E1
PubMed ID: 24106274 | Product(s) Referenced: recombinant E1
PubMed ID: 24157836 | Product(s) Referenced: 6xHis-UBE1

Hebron, M.L. et al. (2012) "Parkin ubiquitinates Tar-DNA binding protein-43 (TDP-43) and promotes its cytosolic accumulation via interaction with histone deacetylase 6 (HDAC6)." J. Biol. Chem.

PubMed ID: 23258539 | Product(s) Referenced: recombinant human ubiquitin, recombinant UbcH7, E1 recombinant enzyme,
PubMed ID: 23459942 | Product(s) Referenced: E1
PubMed ID: 23209297 | Product(s) Referenced: recombinant human Uba1
PubMed ID: 23097446 | Product(s) Referenced: SUMO-activating E1 (SAE1-SAE2)
PubMed ID: 23345618 | Product(s) Referenced: ubiquitin activating enzyme (Ube1)