Product References

Boston Biochem's products have been used successfully in hundreds of UPP-related publications. We have listed our most recent references below to provide our customers with an exceptional resource for product use information. The references are organized to mirror our product divisions for easy location. Products referenced in each article are listed below in red. Please inquire to request archives as we have curated references back to 2003.

Burns, K.E., et al. (2009) "Proteasomal Protein Degradation in Mycobacteria Is Dependent upon a Prokaryotic Ubiquitin-like Protein." J. Biol. Chem. 284(5): 3069-3075.

PubMed ID: 19028679 | Product(s) Referenced: energy regeneration solution

Christopher, B., et al. (2009) “The EBV Deubiquitinating Enzyme, BPLF1, Reduces EBV Ribonucleotide Reductase Activity.” J. Virol. JVI.02195-08v1 .

PubMed ID: 19244336 | Product(s) Referenced: reaction mixture buffer (50 mM Tris, pH 7.5, 2 mM Mg-ATP)

Maerki, S., et al. (2009) “The Cul3–KLHL21 E3 ubiquitin ligase targets Aurora B to midzone microtubules in anaphase and is required for cytokinesis.” J. Cell Biol. 187: 791 - 800.

PubMed ID: 19995937 | Product(s) Referenced: Mg-ATP / ubiquitination reaction buffer

Mao, X,. et al. (2009) "GCN5 is a required cofactor for a ubiquitin ligase that targets NF-kB/RelA." Genes & Dev. 23: 849-861.

PubMed ID: 19339690 | Product(s) Referenced: ATP regenerating buffer

Nakao, R., et al. (2009) "Ubiquitin ligase Cbl-b is a negative regulator for IGF-1 signaling during muscle atrophy caused by unloading." Mol. Cell. Biol.: MCB.01347-08.

PubMed ID: 19546233 | Product(s) Referenced: reaction buffer containing an ATP-regenerating system

Stanisic, V., et al (2009) "OTU Domain-containing Ubiquitin Aldehyde-binding Protein 1 (OTUB1) Deubiquitinates Estrogen Receptor (ER)a and Affects ERa Transcriptional Activity." J. Biol. Chem. 284: 16135-16145 .

PubMed ID: 19383985 | Product(s) Referenced: energy solution

Whitehurst, C.B., et al. (2009) "The Epstein-Barr Virus (EBV) Deubiquitinating Enzyme BPLF1 Reduces EBV Ribonucleotide Reductase Activity." J. Virol. 83: 4345-4353 .

PubMed ID: 19244336 | Product(s) Referenced: Mg-ATP

Bekker-Jensen, S., et al. (2009) "HERC2 coordinates ubiquitin-dependent assembly of DNA repair factors on damaged chromosomes.” Nature cell biology 12(1): 80–86.

PubMed ID: 20023648 | Product(s) Referenced: ubiquitylation reaction buffer

Jin, Z., et al. (2009) "Cullin3-Based Polyubiquitination and p62-Dependent Aggregation of Caspase-8 Mediate Extrinsic Apoptosis Signaling.” Cell 137(4): 721–735.

PubMed ID: 19427028 | Product(s) Referenced: Mg-ATP solution / Ubiquitin Conjugation Reaction Buffer

Brooks, W.S., et al. (2008) "G2E3 Is a Dual Function Ubiquitin Ligase Required for Early Embryonic Development." J. Biol. Chem. 283(32): 22304-22315.

PubMed ID: 18511420 | Product(s) Referenced: Energy Regeneration System

Daulny, A., et al. (2008) "Modulation of RNA polymerase II subunit composition by ubiquitylation." PNAS 105(50): 19649-19654.

PubMed ID: 19064926 | Product(s) Referenced: Energy Regeneration Solution

Karagianni, P., et al. (2008) "ICBP90, a Novel Methyl K9 H3 Binding Protein Linking Protein Ubiquitination with Heterochromatin Formation." Mol. Cell. Biol. 28: 705-17.

PubMed ID: http://mcb.asm.org/content/28/2/705.long | Product(s) Referenced: ATP

Liu, J., et al. (2008) "A therapeutic dose of doxorubicin activates ubiquitin-proteasome system-mediated proteolysis by acting on both the ubiquitination apparatus and proteasome." Am. J. Physiol. Heart.Circ. Physiol. 295(6): H2541-H2550.

PubMed ID: 18978187 | Product(s) Referenced: energy regenerating solution (B-10)

Malakhova O.A. and Zhang D-E. (2008) "ISG15 Inhibits Nedd4 Ubiquitin E3 Activity and Enhances the Innate Antiviral Response." J. Biol. Chem. 283: 8783-8787.

PubMed ID: 18287095 | Product(s) Referenced: ATP energy regeneration system

Sekine K., et al. (2008). "Small Molecules Destabilize cIAP1 by Activating Auto-ubiquitylation." J. Biol. Chem. 283(14): 8961-8968.

PubMed ID: 18230607 | Product(s) Referenced: Mg-ATP

Lu, K., et al. (2008) "Targeting WW domains linker of HECT-type ubiquitin ligase Smurf1 for activation by CKIP-1.“ Nature cell biology 10(8): 994–1002.

PubMed ID: 18641638 | Product(s) Referenced: ubiquitylation assay buffer

Chu, I., et al. (2007). "Src promotes estrogen-dependent estrogen receptor [alpha] proteolysis in human breast cancer." J. Clin. Invest. 117(8): 2205-2215.

PubMed ID: http://www.jci.org/articles/view/21739 | Product(s) Referenced: energy regenerating solution

Hong, K. U., et al. (2007). "Functional Importance of the Anaphase-Promoting Complex-Cdh1-Mediated Degradation of TMAP/CKAP2 in Regulation of Spindle Function and Cytokinesis." Mol. Cell. Biol. 27(10): 3667-3681.

PubMed ID: 17339342 | Product(s) Referenced: energy regeneration solution

Kamynina, E., et al. (2007). "Regulation of Proto-Oncogenic Dbl by Chaperone-Controlled, Ubiquitin-Mediated Degradation.” Mol. Cell. Biol. 27(5): 1809-1822.

PubMed ID: 17178836 | Product(s) Referenced: ATP regeneration solution

Skaar, J. R., et al. (2007). "PARC and CUL7 Form Atypical Cullin RING Ligase Complexes.” Cancer Res. 67(5): 2006-2014.

PubMed ID: 17332328 | Product(s) Referenced: Mg-ATP

Sun, Z., et al. (2007). "Keap1 Controls Post-Induction Repression of the Nrf2-Mediated Antioxidant Response by Escorting Nuclear Export of Nrf2." Mol. Cell. Biol.: 27(18):6334-6349.

PubMed ID: 17636022 | Product(s) Referenced: ATP

Todi, S. V., et al. (2007). "Cellular turnover of the polyglutamine disease protein ataxin-3 is regulated by its catalytic activity." J. Biol. Chem.: 282(40): 29348-29358.

Product(s) Referenced: ATP regeneration system

Dai, M.-S., D. et al. (2006). "Regulation of the MDM2-p53 Pathway by Ribosomal Protein L11 Involves a Post-ubiquitination Mechanism." J. Biol. Chem. 281(34): 24304-24313.

PubMed ID: 16803902 | Product(s) Referenced: Mg-ATP

Havens, C. G., et al. (2006) "Regulation of Late G1/S Phase Transition and APCCdh1 by Reactive Oxygen Species." Mol. Cell. Biol. 26(12): 4701-4711.

PubMed ID: 16738333 | Product(s) Referenced: energy regeneration system

Sangadala, S., et al. (2006). "LIM Mineralization Protein-1 Potentiates Bone Morphogenetic Protein Responsiveness via a Novel Interaction with Smurf1 Resulting in Decreased Ubiquitination of Smads." J. Biol. Chem. 281(25): 17212-17219.

PubMed ID: 16611643 | Product(s) Referenced: ATP / creatine kinase-ATP generating system

Affinity Matrices / Proteins

PubMed ID: 24210823 | Product(s) Referenced: agarose-conjugated ubiquitin-receptor (RAP80-UIMs)
PubMed ID: 24210823 | Product(s) Referenced: agarose-conjugated ubiquitin-receptor (S5a/Angiocidin)
PubMed ID: 24315104 | Product(s) Referenced: poly-ubiquitin binding resin (S5[alpha] peptide agarose)
Product(s) Referenced: ubiquitin-agarose
Product(s) Referenced: Ufm1-agarose
PubMed ID: 23459205 | Product(s) Referenced: LC3 covalently coupled to agarose beads
PubMed ID: 23459205 | Product(s) Referenced: recombinant His-ubqln1
PubMed ID: 23459205 | Product(s) Referenced: recombinant His-ubqln4
PubMed ID: 23358411 | Product(s) Referenced: TUBE2-UBA
PubMed ID: 23785212 | Product(s) Referenced: ubiquitin-conjugated beads
PubMed ID: 23793018 | Product(s) Referenced: TUBE2 agarose beads

Antibodies

PubMed ID: 24210823 | Product(s) Referenced: anti-p53 antibody

ISG15

PubMed ID: 23345508 | Product(s) Referenced: human ISG15-AMC

Enzymes

PubMed ID: 23889301 | Product(s) Referenced: human recombinant Ub activating enzyme [UBE1]
PubMed ID: 23888040 | Product(s) Referenced: SAEII
PubMed ID: 23888040 | Product(s) Referenced: SAEII
PubMed ID: 23990779 | Product(s) Referenced: E1 (SAE1/2)